Lateral visual area layer 4 aspiny 313862167 Cell

Model Type:
Cell
Neurolex IDs: Lateral visual area layer 4
Keywords: Mus musculus, Sst-IRES-Cre
Publication: Gouwens, et. al. (2018) Systematic generation of biophysically detailed models for diverse cortical neuron types.
Authors:
Nathan W Gouwens   Jim Berg   David Feng   Staci A Sorensen   Hongkui Zeng   Michael J Hawrylycz   Christof Koch   Anton Arkhipov  
Translators: Nicholas Cain   Padraig Gleeson   Shreejoy Tripathy  
Sources:
Files:
Model ID NeuroML File
NMLCL001438
Cell_471086533.cell.nml
( view NeuroML )
NMLCH001436
Ca_HVA.channel.nml
( view NeuroML )
NMLCH001446
Ih.channel.nml
( view NeuroML )
NMLCH001465
Kv3_1.channel.nml
( view NeuroML )
NMLCH001471
pas.channel.nml
( view NeuroML )
NMLCH001473
Kv2like.channel.nml
( view NeuroML )
NMLCH001486
NaV.channel.nml
( view NeuroML )
NMLCH001487
SK.channel.nml
( view NeuroML )
NMLCH001511
Ca_LVA.channel.nml
( view NeuroML )
NMLCH001520
Im_v2.channel.nml
( view NeuroML )
NMLCH001529
K_T.channel.nml
( view NeuroML )
NMLCH001536
Kd.channel.nml
( view NeuroML )
NMLCN001518
CaDynamics.nml
( view NeuroML )
Notes: None
Model Id: NMLCL001438
Associated Channels:
Associated Synapses: None
Associated Networks: None
Current Clamp Response
Protocol:
Meta Protocol: -
Stimulus: -
Closest Electrophysiology Cluster
⇛Multi-Spikers (MS)
   ⇛Regular Multi-Spikers (rMS)
      ⇛Fast Spikers (FS)
Differentiating Features
Models with Similar Electrophysiology Properties
All Electrophysiology Properties
Is Passive No
Is Intrinsically Spiking No
Resting Voltage -92.78 mV
Rheobase Current Interval (0.11330, 0.11581] nA
Threshold Current Interval (0.58594, 0.64453] nA
Bias Current (to -80.00 mV) 0.0197 nA
Testing Temperature 34.0 °C
Stability Interval [-3.125, 15.0] nA
AP 1-2 Amplitude Drop 3.3416 mV
AP 1 Steady State Amplitude Change 5.8498 mV
AP 1 Amplitude 43.9203 mV
AP 1 Width at Half Height 0.3500 ms
AP 1 Width (Peak To Trough) 1.8100 ms
AP 1 Rate of Change Peak to Trough -36.6973 mV/ms
AP 1 AHP Depth 22.5018 mV
AP2 Amplitude 40.5787 mV
AP2 Width at Half Height 0.3600 ms
AP 2 Width (Peak to Trough) 1.9600 ms
AP 2 Rate of Change Peak to Trough -32.2770 mV/ms
AP 2 AHP Depth 22.6842 mV
AP 1-2 Amplitude Change Percent -7.6083 %
AP 1-2 Half Width Change Percent 2.8571 %
AP 1-2 Rate of Change Peak to Trough Percent Change -12.0452 %
AP 1-2 AHP Depth Percent Change 0.8109 %
Input Resistance 896.9042 MΩ
AP 1 Delay Mean 18.8500 ms
AP 1 Delay SD 0.0000 ms
AP 2 Delay Mean 34.7800 ms
AP 2 Delay SD 0.0000 ms
Burst 1 ISI Mean 21.1900 ms
Burst 1 ISI SD 0.0000 ms
Initial Accommodation Mean 14.2857 %
Steady State Accommodation Mean 21.4286 %
Accommodation Rate to Steady State 0.3500 %/ms
Accommodation at Steady State Mean -38.2341 %
Accommodation Rate Mean at Steady State 0.2351 ms
ISI CV 11.6225
ISI Median 25.0100 ms
ISI Burst Mean Change 66.0389 %
Spike Rate (Strong Stimulation) 97.0000 Hz
AP 1 Delay Mean (Strong Stimulation) 6.6200 ms
AP 1 Delay SD (Strong Stimulation) 0.0000 ms
AP 2 Delay Mean (Strong Stimulation) 13.5400 ms
AP 2 Delay SD (Strong Stimulation) 0.0000 ms
Burst 1 ISI Mean (Strong Stimulation) 7.2600 ms
Burst 1 ISI SD (Strong Stimulation) 0.0000 ms
Ramp First Spike Time 3045.4900 ms
Frequency Filter Type Constant
3D Structure and Propagation of Activity
L-Measure Properties
Soma Surface 7540.4 µm2
Number of Stems 6.0
Number of Bifurcations 20.0
Number of Branches 46.0
Overall Width 248.967 µm
Overall Height 303.876 µm
Overall Depth 47.04 µm
Average Diameter 0.456302 µm
Total Length 2955.86 µm
Total Surface 5094.32 µm2
Total Volume 2517.84 µm3
Max Euclidean Distance 253.459 µm
Max Path Distance 283.999 µm
Max Branch Order 6.0
Average Contraction 0.865158
Total Fragmentation 3014.0
Partition Asymmetry 0.466667
Average Rall's Ratio 1.58917
Average Bifurcation Angle Local 80.6889 °
Average Bifurcation Angle Remote 52.8291 °
Fractal Dimension 1.04017
Complexity Summary
State Equations 178
Optimal Time-Step 0.02278 ms
Relative Complexity 12.69 HH
Model Size
Sections 46
Compartments 150
State Equations 178
Fixed Time-Step Run Time vs. Voltage Potential Error
Run Time-vs-Error Optimal Time-Step 0.02278 ms
Optimal Time-Step Error 1.61 %
Optimal Time-Step Benchmark Run Time 12.69 HH
 
Maximum Stable Time-Step 0.5 ms
Maximum Stable Time-Step Error 3.17 %
Max. Stable Time-Step Benchmark Run Time 9.03 HH
Variable Time-Step Complexity
CVODE Steady State Step Frequency 4283 Hz
CVODE Steps Per AP 1165
CVODE Benchmark Run Time 30.28 HH
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