Hippocampus Pyramidal CA3 Cell

Model Type:
Cell
Neurolex IDs: Hippocampus CA3 pyramidal cell
Keywords: hippocampus, 2-compartment, CA3, pyramidal
Publication: Pinsky & Rinzel (1994) Intrinsic and network rhythmogenesis in a reduced Traub model for CA3 neurons.
Authors:
P Pinsky   J Rinzel  
Translators: Padraig Gleeson   Justas Birgiolas  
Sources:
Files:
Model ID NeuroML File
NMLCL001122
PinskyRinzel1994.cell.nml
( view NeuroML )
Current Clamp Response:
Instructions
Protocol:
Meta Protocol: -
Stimulus: -

Protocols

The dropdown contains the list of protocols to which the model was subjected. Select one from the drop down to see the model's response.

Stimuli

Some protocols have multiple stimuli (e.g. voltage levels held or current amplitudes injected). If so, a "Stimulus" slider will be visible when a protocol with multiple stimuli is selected. When visible, drag the slider left/right to see the model's response to a specific protocol stimulus. By default, the traces of all protocol stimuli are shown superimposed, each trace indicated by a different color.

Meta-Protocols

Some models will have additional meta-protocol parameters (e.g. different calcium concentration levels, random noise seeds). If available, use the second slider to see the effect of changing the meta-protocol parameter on the model response. When both sliders are visible, their values can be changed independently.

Trace detail

Using the mouse, hover near a point on a trace to see a popup with the point details. Top value shows the time. The bottom left value shows the name of the protocol stimulus, and the bottom right value shows the value of the plotted variable (e.g. voltage or current)

Zoom

The plots can be zoomed in/out to see plot details. On the right side of the plot, use the [+] and [-] buttons to zoom in/out on the center of the plot.

Pan

Once zoomed, the plots can be panned by dragging the mouse or swiping fingers sideways.

Reset Plot

Once a zoom/pan position is set, it will be maintained when the stimulus/meta-protocol parameter is changed. To reset the zoom/pan, click the circular arrow button below the zoom out button. Plot zoom will also be reset when the protocol is changed.

Morphology: Single compartment, abstract, or point cells do not have morphology data.
Cell Properties:
Membrane Properties
Is Passive No
Is Intrinsically Spiking Yes
Resting Voltage N/A mV
Rheobase Current Interval (N/A, N/A] nA
Threshold Current Interval (N/A, N/A] nA
Bias Current (to N/A mV) N/A nA
Testing Temperature 36 (default) °C
Complexity Properties
Sections 1
Compartments 1
State Equations 11
Stability Interval [-10.0, 15.0] nA
 
Maximum Stable dt N/A ms
Maximum Stable dt Error N/A %
Max. Stable dt Benchmark Run time N/A HH
 
Run time-vs-Error Optimal dt N/A ms
Optimal dt Error N/A %
Optimal dt Benchmark Run time N/A HH
 
CVODE Steady State Step Frequency N/A Hz
CVODE Steps Per AP N/A
CVODE Benchmark Run time N/A HH
Associated Channels: None
Associated Synapses: None
Associated Networks: None
Notes: None
Model Id: NMLCL001122
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